Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC005412.3-201ENST00000580309 715 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL138688.1-201ENST00000624851 1594 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC092919.2-201ENST00000623631 1645 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 CNN2P2-201ENST00000443536 909 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 BCRP1-201ENST00000444246 691 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 CNN2P3-201ENST00000450201 906 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC109322.1-201ENST00000524499 1264 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL136317.3-201ENST00000618497 906 ntBASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.32■□□□□ 0.2
TMX2-CTNND1H3BSU7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TFAMP1-201ENST00000412727 736 ntBASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMX2-CTNND1H3BSU7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms