Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 AC011270.2-201ENST00000624293 2550 ntBASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 AC131009.4-201ENST00000624048 1740 ntBASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 AL031055.1-201ENST00000606362 631 ntBASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA2E9PIF3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC092474.2-201ENST00000424288 719 ntBASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC069335.1-201ENST00000489972 472 ntBASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC109635.5-201ENST00000533593 962 ntBASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC092364.2-202ENST00000597012 1073 ntBASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA2E9PIF3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA2E9PIF3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA2E9PIF3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.08■□□□□ 0
NPIPA2E9PIF3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.08■□□□□ 0
NPIPA2E9PIF3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA2E9PIF3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms