Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 MIR4538-201ENST00000581377 78 ntBASIC16.14■□□□□ 0.17
C4orf47A7E2U8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4orf47A7E2U8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.13■□□□□ 0.17
C4orf47A7E2U8 TMEM14DP-201ENST00000422205 345 ntBASIC16.13■□□□□ 0.17
C4orf47A7E2U8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4orf47A7E2U8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 LINC00304-203ENST00000565008 1864 ntBASIC16.12■□□□□ 0.17
C4orf47A7E2U8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AL512361.1-201ENST00000554200 418 ntBASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 CTBP2P3-201ENST00000585629 1255 ntBASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 AL645608.8-201ENST00000606034 2086 ntBASIC16.12■□□□□ 0.17
C4orf47A7E2U8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4orf47A7E2U8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms