Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC22.14■■□□□ 1.14
SBNO1A3KN83 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.14■■□□□ 1.13
SBNO1A3KN83 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SBNO1A3KN83 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 KRT8P44-201ENST00000441609 1350 ntBASIC22.13■■□□□ 1.13
SBNO1A3KN83 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SBNO1A3KN83 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SBNO1A3KN83 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 USB1-203ENST00000539737 1212 ntTSL 2 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 TUBB1P2-201ENST00000422712 1306 ntBASIC22.12■■□□□ 1.13
SBNO1A3KN83 TUBB1P1-201ENST00000503144 1300 ntBASIC22.12■■□□□ 1.13
SBNO1A3KN83 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 PDIA3P1-201ENST00000471856 1510 ntBASIC22.12■■□□□ 1.13
SBNO1A3KN83 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 AP002490.2-201ENST00000524791 560 ntBASIC22.12■■□□□ 1.13
SBNO1A3KN83 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
SBNO1A3KN83 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SBNO1A3KN83 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AL391256.1-201ENST00000443260 1855 ntBASIC22.11■■□□□ 1.13
SBNO1A3KN83 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AC093525.8-201ENST00000624099 1342 ntBASIC22.11■■□□□ 1.13
SBNO1A3KN83 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AL512652.2-201ENST00000625156 1716 ntBASIC22.11■■□□□ 1.13
SBNO1A3KN83 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms