Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 MTND6P24-201ENST00000440466 518 ntBASIC24.21■■□□□ 1.47
HFM1A2PYH4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 KRT8P12-202ENST00000472924 1397 ntBASIC24.21■■□□□ 1.47
HFM1A2PYH4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 IMPDH1P4-201ENST00000445028 1534 ntBASIC24.21■■□□□ 1.47
HFM1A2PYH4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
HFM1A2PYH4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
HFM1A2PYH4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
HFM1A2PYH4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC24.2■■□□□ 1.47
HFM1A2PYH4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
HFM1A2PYH4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.2■■□□□ 1.47
HFM1A2PYH4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
HFM1A2PYH4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 MIR4745-201ENST00000577608 62 ntBASIC24.2■■□□□ 1.46
HFM1A2PYH4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 AC026979.3-201ENST00000607315 403 ntBASIC24.2■■□□□ 1.46
HFM1A2PYH4 AL589739.1-201ENST00000607720 493 ntBASIC24.2■■□□□ 1.46
HFM1A2PYH4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
HFM1A2PYH4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HFM1A2PYH4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.19■■□□□ 1.46
HFM1A2PYH4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 AC027369.6-201ENST00000525520 931 ntBASIC24.19■■□□□ 1.46
HFM1A2PYH4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 AC138761.1-201ENST00000584393 385 ntBASIC24.19■■□□□ 1.46
HFM1A2PYH4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC24.19■■□□□ 1.46
HFM1A2PYH4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HFM1A2PYH4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 RNA5SP421-201ENST00000516864 134 ntBASIC24.18■■□□□ 1.46
HFM1A2PYH4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AC087499.5-201ENST00000452760 1342 ntBASIC24.18■■□□□ 1.46
HFM1A2PYH4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AL139010.1-201ENST00000454878 894 ntBASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms