Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC020658.6-201ENST00000623564 1870 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 TMBIM7P-203ENST00000641617 1718 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 HOMER2P1-201ENST00000455653 964 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC010203.1-204ENST00000548782 407 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 MIR4497-201ENST00000583208 89 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AL590326.2-201ENST00000625139 305 ntBASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRDV1A0A1B0GX56 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 BX664615.1-201ENST00000443558 458 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 AC145285.6-201ENST00000604632 637 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 IGHV3-41-201ENST00000613121 348 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 PGM5P2-202ENST00000637225 1043 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRDV1A0A1B0GX56 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms