Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC091304.2-201ENST00000564639 760 ntBASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 HYMAI-201ENST00000635591 3347 ntBASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-3A0A0A0MS03 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC012569.1-201ENST00000591191 1524 ntBASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 ACTL9-202ENST00000612068 1252 ntBASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 PPT1-215ENST00000641471 2368 ntBASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV5-3A0A0A0MS03 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 RPS2P1-201ENST00000434010 821 ntBASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms