Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LINC00895-201ENST00000629028 1637 ntBASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 MRPL3P1-201ENST00000400109 1033 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 MRPL20P1-201ENST00000400819 433 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC092910.1-201ENST00000482027 1129 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC25A6P2-201ENST00000497974 877 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC091167.2-201ENST00000579581 588 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC25A6P4-201ENST00000586535 553 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC117500.6-201ENST00000624871 588 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AC129492.6-201ENST00000611383 1305 ntBASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DRB4X5D2U9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms