Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AL512652.2-201ENST00000625156 1716 ntBASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AC104596.2-201ENST00000512793 793 ntBASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 RARRES2P5-201ENST00000564013 466 ntBASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 MIR4538-201ENST00000581377 78 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 AC025048.3-201ENST00000590609 569 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 BTNL10-201ENST00000595971 695 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 AC010319.3-201ENST00000597028 470 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 AC084346.2-201ENST00000607097 949 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 AC005702.4-201ENST00000618393 416 ntBASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCBQ9Y3I0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 CROCCP2-202ENST00000412962 2773 ntBASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 KRT43P-201ENST00000434019 910 ntBASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms