Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 KRT8P39-201ENST00000396270 1433 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AL353135.1-201ENST00000606729 504 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AC114341.1-201ENST00000618070 349 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AC079776.2-201ENST00000641154 1609 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NSUN5P1-202ENST00000421140 1535 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NSUN5P2-203ENST00000457352 1529 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 KRT18P1-202ENST00000452408 1331 ntBASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2D4Q9Y2X8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
UBE2D4Q9Y2X8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
UBE2D4Q9Y2X8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 REXO1L8P-201ENST00000604378 1897 ntBASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 PCGF3-213ENST00000620529 1899 ntBASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 KRT17P6-201ENST00000453795 1220 ntBASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.58□□□□□ -0.56
UBE2D4Q9Y2X8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms