Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 AC120498.9-201ENST00000339021 3867 ntBASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZC3H4Q9UPT8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 RPL7P3-201ENST00000441388 714 ntBASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 KRT8P13-201ENST00000463294 1010 ntBASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 MIR5189-201ENST00000577370 114 ntBASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H4Q9UPT8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 ACTG1P3-201ENST00000431775 1114 ntBASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AP000812.2-201ENST00000538934 718 ntBASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H4Q9UPT8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms