Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 AC008677.1-201ENST00000519230 1561 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 KRT8P39-201ENST00000396270 1433 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 KLF2P3-201ENST00000451977 1087 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 AC125807.1-201ENST00000483097 614 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 DUX4L27-201ENST00000554796 1261 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 MIR3197-201ENST00000582241 73 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 AC092364.2-202ENST00000597012 1073 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 MIR6080-201ENST00000617359 66 ntBASIC15.21■□□□□ 0.03
LRFN1Q9P244 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.21■□□□□ 0.02
LRFN1Q9P244 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.21■□□□□ 0.02
LRFN1Q9P244 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRFN1Q9P244 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 AC107890.1-201ENST00000422478 521 ntBASIC15.2■□□□□ 0.02
LRFN1Q9P244 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 SPCS2P1-201ENST00000561636 679 ntBASIC15.2■□□□□ 0.02
LRFN1Q9P244 AC051619.7-201ENST00000568314 623 ntBASIC15.2■□□□□ 0.02
LRFN1Q9P244 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 AC005498.2-205ENST00000593218 784 ntBASIC15.2■□□□□ 0.02
LRFN1Q9P244 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRFN1Q9P244 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRFN1Q9P244 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 MIR943-201ENST00000401286 94 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms