Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 AC006538.1-201ENST00000567905 1585 ntBASIC18.41■□□□□ 0.54
VTA1Q9NP79 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 AL391825.1-201ENST00000457671 1364 ntBASIC18.41■□□□□ 0.54
VTA1Q9NP79 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTA1Q9NP79 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.41■□□□□ 0.54
VTA1Q9NP79 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 AC060834.1-201ENST00000443027 2032 ntBASIC18.4■□□□□ 0.54
VTA1Q9NP79 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 LTB4R2-202ENST00000528054 3092 ntBASIC18.4■□□□□ 0.54
VTA1Q9NP79 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 AC044860.1-202ENST00000559481 777 ntBASIC18.4■□□□□ 0.54
VTA1Q9NP79 AL033527.5-202ENST00000641632 1098 ntBASIC18.4■□□□□ 0.54
VTA1Q9NP79 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTA1Q9NP79 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VTA1Q9NP79 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VTA1Q9NP79 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
VTA1Q9NP79 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.39■□□□□ 0.54
VTA1Q9NP79 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.39■□□□□ 0.54
VTA1Q9NP79 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VTA1Q9NP79 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.39■□□□□ 0.54
VTA1Q9NP79 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 AC087499.6-201ENST00000411576 835 ntBASIC18.39■□□□□ 0.53
VTA1Q9NP79 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 AC114501.2-201ENST00000439631 535 ntBASIC18.39■□□□□ 0.53
VTA1Q9NP79 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 GNAQP1-201ENST00000444815 1067 ntBASIC18.39■□□□□ 0.53
VTA1Q9NP79 KRT17P7-201ENST00000451704 1104 ntBASIC18.39■□□□□ 0.53
VTA1Q9NP79 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms