Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AL596087.1-201ENST00000400979 1969 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 HLA-J-202ENST00000469281 1241 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC145285.6-201ENST00000604632 637 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC011558.1-201ENST00000623459 338 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC067750.1-201ENST00000608826 6545 ntBASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SND1-IT1Q9HBX3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms