Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AC073621.1-201ENST00000392730 636 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 DUSP5P1-201ENST00000441325 1139 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AC073648.2-201ENST00000510116 352 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AC006449.6-201ENST00000612330 2296 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AL365203.3-201ENST00000609742 2057 ntBASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRTM1Q9HBL6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 HCG4-201ENST00000418983 998 ntBASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 POU5F1P6-201ENST00000466990 990 ntBASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CLEC4GP1-201ENST00000596555 870 ntBASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 LINC01144-201ENST00000626198 1710 ntBASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LRTM1Q9HBL6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms