Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 AC022188.1-201ENST00000620960 1664 ntBASIC15.86■□□□□ 0.13
BRF2Q9HAW0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 RHOQP3-201ENST00000437982 621 ntBASIC15.86■□□□□ 0.13
BRF2Q9HAW0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.86■□□□□ 0.13
BRF2Q9HAW0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BRF2Q9HAW0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 Z83851.2-201ENST00000609564 659 ntBASIC15.85■□□□□ 0.13
BRF2Q9HAW0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BRF2Q9HAW0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 PCDHA1-201ENST00000378133 2726 ntBASIC15.84■□□□□ 0.13
BRF2Q9HAW0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 AC109635.5-201ENST00000533593 962 ntBASIC15.84■□□□□ 0.13
BRF2Q9HAW0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 AC010507.1-201ENST00000633895 436 ntBASIC15.84■□□□□ 0.13
BRF2Q9HAW0 AC007064.4-201ENST00000637740 555 ntBASIC15.84■□□□□ 0.13
BRF2Q9HAW0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 REXO1L8P-201ENST00000604378 1897 ntBASIC15.84■□□□□ 0.13
BRF2Q9HAW0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.84■□□□□ 0.13
BRF2Q9HAW0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms