Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP13A3Q9H7F0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP13A3Q9H7F0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 HLA-A-202ENST00000376806 1854 ntBASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AC254562.1-201ENST00000417586 456 ntBASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AP000344.2-201ENST00000512987 629 ntBASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 SNHG9-202ENST00000564014 471 ntBASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 AL031731.1-201ENST00000642131 2094 ntBASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ATP13A3Q9H7F0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AL162727.3-201ENST00000635661 2787 ntBASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 RPS8P6-201ENST00000426177 609 ntBASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AC020765.3-201ENST00000613051 740 ntBASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AL513210.1-201ENST00000629608 234 ntBASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 AC105339.1-204ENST00000636249 355 ntBASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.75■□□□□ 0.27
ATP13A3Q9H7F0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms