Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 HLA-A-202ENST00000376806 1854 ntBASIC17.83■□□□□ 0.44
NXF3Q9H4D5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NXF3Q9H4D5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 AL353705.2-201ENST00000428243 662 ntBASIC17.81■□□□□ 0.44
NXF3Q9H4D5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 BANF1P1-201ENST00000553684 263 ntBASIC17.81■□□□□ 0.44
NXF3Q9H4D5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 AC073592.8-201ENST00000624126 511 ntBASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.81■□□□□ 0.44
NXF3Q9H4D5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 PCGF3-213ENST00000620529 1899 ntBASIC17.8■□□□□ 0.44
NXF3Q9H4D5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 MIR661-201ENST00000384842 89 ntBASIC17.8■□□□□ 0.44
NXF3Q9H4D5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 AL138828.2-201ENST00000615812 383 ntBASIC17.8■□□□□ 0.44
NXF3Q9H4D5 AL589702.1-201ENST00000641229 1509 ntBASIC17.8■□□□□ 0.44
NXF3Q9H4D5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms