Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 AL355306.1-201ENST00000415580 579 ntBASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 MTDHP5-201ENST00000598980 586 ntBASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM60Q9H2L4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 HTR5BP-201ENST00000430851 1154 ntBASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AL138918.1-201ENST00000568306 659 ntBASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM60Q9H2L4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 KRT18P34-201ENST00000488218 1270 ntBASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 AC010327.4-202ENST00000591484 748 ntBASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 AL161645.1-201ENST00000622716 1255 ntBASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 AC005622.1-201ENST00000636801 1703 ntBASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM60Q9H2L4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 REXO1L8P-201ENST00000604378 1897 ntBASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TMEM60Q9H2L4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms