Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NPAP1P7-201ENST00000613027 823 ntBASIC16.75■□□□□ 0.27
VPS11Q9H270 AP005117.1-201ENST00000584346 1413 ntBASIC16.75■□□□□ 0.27
VPS11Q9H270 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VPS11Q9H270 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VPS11Q9H270 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS11Q9H270 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS11Q9H270 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VPS11Q9H270 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VPS11Q9H270 AC132008.2-207ENST00000454517 770 ntBASIC16.74■□□□□ 0.27
VPS11Q9H270 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS11Q9H270 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.74■□□□□ 0.27
VPS11Q9H270 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.74■□□□□ 0.27
VPS11Q9H270 AP001269.4-201ENST00000609611 512 ntBASIC16.74■□□□□ 0.27
VPS11Q9H270 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS11Q9H270 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS11Q9H270 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS11Q9H270 GGT3P-204ENST00000453783 1664 ntBASIC16.74■□□□□ 0.27
VPS11Q9H270 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS11Q9H270 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS11Q9H270 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 NCF1C-201ENST00000438382 1427 ntBASIC16.73■□□□□ 0.27
VPS11Q9H270 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VPS11Q9H270 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.73■□□□□ 0.27
VPS11Q9H270 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.73■□□□□ 0.27
VPS11Q9H270 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.73■□□□□ 0.27
VPS11Q9H270 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 GGT4P-201ENST00000623672 1708 ntBASIC16.73■□□□□ 0.27
VPS11Q9H270 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.73■□□□□ 0.27
VPS11Q9H270 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VPS11Q9H270 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS11Q9H270 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VPS11Q9H270 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 AC010491.1-201ENST00000563101 2797 ntBASIC16.72■□□□□ 0.27
VPS11Q9H270 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.72■□□□□ 0.27
VPS11Q9H270 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms