Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 ATP5G2P1-201ENST00000433580 426 ntBASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 PAWRP1-201ENST00000451083 565 ntBASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MIR4492-201ENST00000581627 80 ntBASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 REXO1L8P-201ENST00000604378 1897 ntBASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 KRT16P4-201ENST00000453883 522 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC087163.2-201ENST00000457299 853 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 FOSL1P1-201ENST00000511041 816 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC106795.1-205ENST00000512851 1056 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC002310.6-201ENST00000624451 1377 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AC144831.1-201ENST00000573312 2656 ntBASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDHD3Q9BSH5 AL356309.3-201ENST00000624132 1934 ntBASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 AC093458.2-201ENST00000623150 629 ntBASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 AL139288.1-201ENST00000623748 933 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms