Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 REXO1L8P-201ENST00000604378 1897 ntBASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC22CQ9BRL7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC097637.2-201ENST00000624096 1997 ntBASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC111152.3-201ENST00000569699 673 ntBASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 STK25P1-201ENST00000585406 838 ntBASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC22CQ9BRL7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms