Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
VGLL1Q99990 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VGLL1Q99990 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.65□□□□□ -0.38
VGLL1Q99990 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 POM121L3P-201ENST00000419331 1163 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 PCED1CP-201ENST00000419887 785 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 ABCD1P5-201ENST00000445663 754 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.65□□□□□ -0.38
VGLL1Q99990 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 AP000867.3-201ENST00000524675 377 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.65□□□□□ -0.38
VGLL1Q99990 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.65□□□□□ -0.38
VGLL1Q99990 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.65□□□□□ -0.38
VGLL1Q99990 TERC-201ENST00000602385 541 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.65□□□□□ -0.38
VGLL1Q99990 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.65□□□□□ -0.38
VGLL1Q99990 AC079776.2-201ENST00000641154 1609 ntBASIC12.65□□□□□ -0.38
VGLL1Q99990 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.39
VGLL1Q99990 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
VGLL1Q99990 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 AL590787.1-201ENST00000568856 1315 ntBASIC12.64□□□□□ -0.39
VGLL1Q99990 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.64□□□□□ -0.39
VGLL1Q99990 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VGLL1Q99990 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VGLL1Q99990 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.64□□□□□ -0.39
VGLL1Q99990 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VGLL1Q99990 AC104819.1-201ENST00000504587 486 ntBASIC12.64□□□□□ -0.39
VGLL1Q99990 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.64□□□□□ -0.39
VGLL1Q99990 AC073592.4-201ENST00000623827 446 ntBASIC12.64□□□□□ -0.39
VGLL1Q99990 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 AC105917.1-201ENST00000506637 2539 ntBASIC12.64□□□□□ -0.39
VGLL1Q99990 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.64□□□□□ -0.39
VGLL1Q99990 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.64□□□□□ -0.39
VGLL1Q99990 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.64□□□□□ -0.39
VGLL1Q99990 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VGLL1Q99990 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms