Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE1Q99829 AF238378.1-201ENST00000526806 358 ntBASIC16.61■□□□□ 0.25
CPNE1Q99829 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.61■□□□□ 0.25
CPNE1Q99829 AC020765.3-201ENST00000613051 740 ntBASIC16.61■□□□□ 0.25
CPNE1Q99829 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE1Q99829 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE1Q99829 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE1Q99829 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE1Q99829 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CPNE1Q99829 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE1Q99829 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CPNE1Q99829 PAUPAR-201ENST00000630360 2965 ntBASIC16.6■□□□□ 0.25
CPNE1Q99829 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 AC073621.1-201ENST00000392730 636 ntBASIC16.6■□□□□ 0.25
CPNE1Q99829 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE1Q99829 AC136632.2-201ENST00000512891 861 ntBASIC16.6■□□□□ 0.25
CPNE1Q99829 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE1Q99829 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.6■□□□□ 0.25
CPNE1Q99829 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 REXO1L8P-201ENST00000604378 1897 ntBASIC16.6■□□□□ 0.25
CPNE1Q99829 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CPNE1Q99829 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE1Q99829 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE1Q99829 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.59■□□□□ 0.25
CPNE1Q99829 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MIR1224-201ENST00000408193 85 ntBASIC16.59■□□□□ 0.25
CPNE1Q99829 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 AC008667.4-201ENST00000607370 168 ntBASIC16.59■□□□□ 0.25
CPNE1Q99829 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CPNE1Q99829 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CPNE1Q99829 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms