Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL662844.4-201ENST00000606367 2838 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 KRT8P39-201ENST00000396270 1433 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.13■□□□□ 0.01
NPAS1Q99742 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 AP002490.2-201ENST00000524791 560 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 AC002347.1-201ENST00000569543 541 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 AC068137.2-201ENST00000605408 478 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 AL031055.1-201ENST00000606362 631 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
NPAS1Q99742 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 AC008741.2-201ENST00000612792 3115 ntBASIC15.13■□□□□ 0.01
NPAS1Q99742 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPAS1Q99742 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 AL031731.1-201ENST00000642131 2094 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NPAS1Q99742 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 MCCD1P2-201ENST00000423228 335 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.12■□□□□ 0.01
NPAS1Q99742 AC140658.5-201ENST00000438532 169 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.12■□□□□ 0.01
NPAS1Q99742 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.12■□□□□ 0.01
NPAS1Q99742 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 AC010327.4-202ENST00000591484 748 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 AC091812.2-201ENST00000619081 385 ntBASIC15.12■□□□□ 0.01
NPAS1Q99742 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
NPAS1Q99742 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.12■□□□□ 0.01
NPAS1Q99742 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS1Q99742 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS1Q99742 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms