Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 AC093214.1-201ENST00000511688 1107 ntBASIC16.06■□□□□ 0.16
SLC38A3Q99624 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 SPCS2P1-201ENST00000561636 679 ntBASIC16.06■□□□□ 0.16
SLC38A3Q99624 MIR3197-201ENST00000582241 73 ntBASIC16.06■□□□□ 0.16
SLC38A3Q99624 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 LINC02084-201ENST00000606069 1096 ntBASIC16.06■□□□□ 0.16
SLC38A3Q99624 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A3Q99624 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A3Q99624 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 RNA5SP421-201ENST00000516864 134 ntBASIC16.05■□□□□ 0.16
SLC38A3Q99624 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A3Q99624 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A3Q99624 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC38A3Q99624 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC38A3Q99624 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms