Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.77■□□□□ 0.11
BBS4Q96RK4 AL662844.4-201ENST00000606367 2838 ntBASIC15.77■□□□□ 0.11
BBS4Q96RK4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.77■□□□□ 0.11
BBS4Q96RK4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
BBS4Q96RK4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
BBS4Q96RK4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 SNX33P1-201ENST00000592116 1762 ntBASIC15.77■□□□□ 0.11
BBS4Q96RK4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BBS4Q96RK4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 AC009078.2-202ENST00000463353 338 ntBASIC15.76■□□□□ 0.11
BBS4Q96RK4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 OR7E47P-204ENST00000575924 449 ntBASIC15.76■□□□□ 0.11
BBS4Q96RK4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 AC012569.1-201ENST00000591191 1524 ntBASIC15.76■□□□□ 0.11
BBS4Q96RK4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.76■□□□□ 0.11
BBS4Q96RK4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BBS4Q96RK4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 TNRC18P3-201ENST00000441896 2691 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 AL513477.1-201ENST00000602865 2407 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 AL512652.2-201ENST00000625156 1716 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 CRYGEP-201ENST00000412192 528 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 FAM185BP-201ENST00000443595 716 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 UNC93B6-202ENST00000528242 690 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 SLC25A6P4-201ENST00000586535 553 ntBASIC15.75■□□□□ 0.11
BBS4Q96RK4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
BBS4Q96RK4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS4Q96RK4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms