Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC232323.1-201ENST00000540724 2099 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 REXO1L5P-201ENST00000622260 2098 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC096733.2-201ENST00000609937 1394 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 DGCR10-201ENST00000609839 495 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC113410.3-201ENST00000623366 203 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AL049637.2-201ENST00000641778 930 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC097637.2-201ENST00000624096 1997 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 AC004817.3-201ENST00000602957 2129 ntBASIC15.67■□□□□ 0.1
NR1H4Q96RI1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H4Q96RI1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 GCSHP5-201ENST00000443090 522 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 CA15P1-201ENST00000481698 905 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 REXO1L10P-201ENST00000615707 1290 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 REXO1L12P-201ENST00000622156 912 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 AL390755.1-201ENST00000623716 2027 ntBASIC15.66■□□□□ 0.1
NR1H4Q96RI1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms