Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 AC092364.2-201ENST00000596710 2692 ntBASIC15.74■□□□□ 0.11
COL21A1Q96P44 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 NFIC-211ENST00000641145 8399 ntBASIC15.74■□□□□ 0.11
COL21A1Q96P44 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 LINC00895-201ENST00000629028 1637 ntBASIC15.73■□□□□ 0.11
COL21A1Q96P44 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PAWRP1-201ENST00000451083 565 ntBASIC15.73■□□□□ 0.11
COL21A1Q96P44 IGHV3-22-201ENST00000520721 359 ntBASIC15.73■□□□□ 0.11
COL21A1Q96P44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.73■□□□□ 0.11
COL21A1Q96P44 KRT8P49-201ENST00000604166 1432 ntBASIC15.73■□□□□ 0.11
COL21A1Q96P44 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL21A1Q96P44 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
COL21A1Q96P44 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 ALOX12P2-203ENST00000570921 1945 ntBASIC15.72■□□□□ 0.11
COL21A1Q96P44 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 IL9RP2-201ENST00000423948 1312 ntBASIC15.72■□□□□ 0.11
COL21A1Q96P44 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 RNA5SP415-201ENST00000517246 115 ntBASIC15.72■□□□□ 0.11
COL21A1Q96P44 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 BX640515.1-201ENST00000617215 977 ntBASIC15.72■□□□□ 0.11
COL21A1Q96P44 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms