Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AL035456.1-201ENST00000456064 1369 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AC009477.1-201ENST00000452936 217 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 KRT18P34-201ENST00000488218 1270 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 TP53TG3HP-202ENST00000569755 579 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 AC060834.1-201ENST00000443027 2032 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC46A1Q96NT5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 AC106820.2-201ENST00000563775 3264 ntBASIC15.79■□□□□ 0.12
SLC46A1Q96NT5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms