Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AC007967.3-201ENST00000434308 558 ntBASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AC112907.2-201ENST00000448639 330 ntBASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AL139011.1-202ENST00000642063 584 ntBASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CHMP6Q96FZ7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC126755.1-201ENST00000525846 6405 ntBASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AP003733.1-201ENST00000491725 852 ntBASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AC006011.2-201ENST00000621313 1158 ntBASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 AL021920.2-201ENST00000624828 1351 ntBASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP6Q96FZ7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 AC138035.3-201ENST00000622706 2791 ntBASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms