Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 RHOQP3-201ENST00000437982 621 ntBASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AC145285.3-201ENST00000564603 959 ntBASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 MIR3909-201ENST00000579518 119 ntBASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AC020765.3-201ENST00000613051 740 ntBASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RHBDF1Q96CC6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 POU5F1P6-201ENST00000466990 990 ntBASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 AC034105.1-201ENST00000563488 319 ntBASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 AL031055.1-201ENST00000606362 631 ntBASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDF1Q96CC6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RHBDF1Q96CC6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RHBDF1Q96CC6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RHBDF1Q96CC6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.14■□□□□ 0.18
RHBDF1Q96CC6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.14■□□□□ 0.18
RHBDF1Q96CC6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 AC104109.2-201ENST00000602919 1418 ntBASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms