Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF34Q969K3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF34Q969K3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF34Q969K3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF34Q969K3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF34Q969K3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.36■□□□□ 0.37
RNF34Q969K3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF34Q969K3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RNF34Q969K3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 MIR1233-2-201ENST00000408138 82 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 MIR1233-1-201ENST00000408722 82 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF34Q969K3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF34Q969K3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF34Q969K3 AL009183.1-201ENST00000603760 355 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 AC091812.2-201ENST00000619081 385 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 C20orf181-201ENST00000623918 480 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 AL139011.1-202ENST00000642063 584 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF34Q969K3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF34Q969K3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 FLJ38576-201ENST00000623820 2459 ntBASIC17.36■□□□□ 0.37
RNF34Q969K3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF34Q969K3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF34Q969K3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF34Q969K3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF34Q969K3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF34Q969K3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF34Q969K3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF34Q969K3 AC005829.1-201ENST00000570002 483 ntBASIC17.35■□□□□ 0.37
RNF34Q969K3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 AC021097.1-201ENST00000607902 574 ntBASIC17.35■□□□□ 0.37
RNF34Q969K3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF34Q969K3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 AC006538.1-201ENST00000567905 1585 ntBASIC17.35■□□□□ 0.37
RNF34Q969K3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF34Q969K3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF34Q969K3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF34Q969K3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms