Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
HPS1Q92902 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HPS1Q92902 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 KRT8P10-201ENST00000450021 1447 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
HPS1Q92902 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 TSPY12P-201ENST00000421279 868 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.28■□□□□ 0.04
HPS1Q92902 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 UNC93B7-201ENST00000509439 705 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS1Q92902 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 LINC00304-203ENST00000565008 1864 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS1Q92902 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 AC116353.5-201ENST00000638148 1699 ntBASIC15.28■□□□□ 0.04
HPS1Q92902 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS1Q92902 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS1Q92902 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 AC233702.3-201ENST00000578656 1387 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 AC022898.2-201ENST00000616822 1312 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HPS1Q92902 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS1Q92902 AC246785.2-201ENST00000432512 513 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.27■□□□□ 0.04
HPS1Q92902 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 KRT18P31-201ENST00000506277 1292 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 FOSL1P1-201ENST00000511041 816 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.27■□□□□ 0.04
HPS1Q92902 AC074051.2-201ENST00000565115 352 ntBASIC15.27■□□□□ 0.04
HPS1Q92902 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.27■□□□□ 0.04
HPS1Q92902 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS1Q92902 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.27■□□□□ 0.03
HPS1Q92902 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HPS1Q92902 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 AC073347.1-201ENST00000421633 2643 ntBASIC15.27■□□□□ 0.03
HPS1Q92902 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HPS1Q92902 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.27■□□□□ 0.03
HPS1Q92902 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HPS1Q92902 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS1Q92902 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms