Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AC018529.1-201ENST00000613063 361 ntBASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AC007967.4-201ENST00000614700 386 ntBASIC14.87□□□□□ -0.03
RNF138Q8WVD3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF138Q8WVD3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.86□□□□□ -0.03
RNF138Q8WVD3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC051619.7-201ENST00000568314 623 ntBASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 AC084018.2-201ENST00000613093 2607 ntBASIC14.86□□□□□ -0.03
RNF138Q8WVD3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF138Q8WVD3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF138Q8WVD3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms