Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMC1Q8TDI8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TMC1Q8TDI8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TMC1Q8TDI8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AC006277.1-201ENST00000624348 1610 ntBASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AP000842.3-202ENST00000569238 1080 ntBASIC23.04■■□□□ 1.28
TMC1Q8TDI8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AC021097.1-201ENST00000607902 574 ntBASIC23.04■■□□□ 1.28
TMC1Q8TDI8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AP001059.3-201ENST00000619053 235 ntBASIC23.04■■□□□ 1.28
TMC1Q8TDI8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.04■■□□□ 1.28
TMC1Q8TDI8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 SPDYE14P-201ENST00000442619 822 ntBASIC23.03■■□□□ 1.28
TMC1Q8TDI8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 AC069262.1-201ENST00000539058 672 ntBASIC23.03■■□□□ 1.28
TMC1Q8TDI8 AC011467.4-201ENST00000594891 528 ntBASIC23.03■■□□□ 1.28
TMC1Q8TDI8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMC1Q8TDI8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC008677.1-201ENST00000519230 1561 ntBASIC23.02■■□□□ 1.28
TMC1Q8TDI8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AC084121.4-201ENST00000641598 221 ntBASIC23.02■■□□□ 1.28
TMC1Q8TDI8 AF228730.8-201ENST00000642140 221 ntBASIC23.02■■□□□ 1.28
TMC1Q8TDI8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 TUBB3P1-201ENST00000405796 1332 ntBASIC23.02■■□□□ 1.28
TMC1Q8TDI8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC23.02■■□□□ 1.28
TMC1Q8TDI8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
TMC1Q8TDI8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 PCDHA14-201ENST00000506751 2298 ntBASIC23.01■■□□□ 1.27
TMC1Q8TDI8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TMC1Q8TDI8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms