Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HMGA1P7-201ENST00000406908 502 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AL031432.2-201ENST00000566714 459 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AL928711.1-201ENST00000570165 459 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AL121894.2-201ENST00000602977 491 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AL645728.2-201ENST00000641974 660 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AC096734.2-201ENST00000562054 433 ntBASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 LINC01144-201ENST00000626198 1710 ntBASIC15.53■□□□□ 0.08
NUP43Q8NFH3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NUP43Q8NFH3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AC104109.2-201ENST00000602919 1418 ntBASIC15.52■□□□□ 0.08
NUP43Q8NFH3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms