Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 AL031731.1-201ENST00000642131 2094 ntBASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AL596257.1-201ENST00000641463 2694 ntBASIC14.53□□□□□ -0.08
CPEB3Q8NE35 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 ALOX12P2-203ENST00000570921 1945 ntBASIC14.53□□□□□ -0.08
CPEB3Q8NE35 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 RNU1-129P-201ENST00000384064 167 ntBASIC14.53□□□□□ -0.08
CPEB3Q8NE35 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 U1.21-201ENST00000580816 167 ntBASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPEB3Q8NE35 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CPEB3Q8NE35 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.52□□□□□ -0.09
CPEB3Q8NE35 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms