Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 RN7SL828P-201ENST00000607615 303 ntBASIC12.97□□□□□ -0.33
C3orf56Q8N813 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 REXO1L6P-201ENST00000603433 1515 ntBASIC12.97□□□□□ -0.33
C3orf56Q8N813 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C3orf56Q8N813 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.97□□□□□ -0.33
C3orf56Q8N813 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 RN7SL618P-201ENST00000477850 296 ntBASIC12.96□□□□□ -0.33
C3orf56Q8N813 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 AL512343.1-201ENST00000605837 169 ntBASIC12.96□□□□□ -0.33
C3orf56Q8N813 COX11-210ENST00000639671 696 ntBASIC12.96□□□□□ -0.33
C3orf56Q8N813 AL033527.4-201ENST00000641026 673 ntBASIC12.96□□□□□ -0.33
C3orf56Q8N813 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
C3orf56Q8N813 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C3orf56Q8N813 KRT18P55-202ENST00000578578 1546 ntBASIC12.96□□□□□ -0.33
C3orf56Q8N813 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C3orf56Q8N813 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.96□□□□□ -0.34
C3orf56Q8N813 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 AL023806.1-201ENST00000603994 1649 ntBASIC12.95□□□□□ -0.34
C3orf56Q8N813 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C3orf56Q8N813 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.95□□□□□ -0.34
C3orf56Q8N813 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms