Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AL078595.1-201ENST00000404458 226 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC005104.2-201ENST00000427818 678 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 RPL13AP23-201ENST00000480739 586 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC002558.1-201ENST00000488906 803 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 TRIM36-IT1-201ENST00000503723 881 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 IGHV3-52-201ENST00000519770 353 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC139887.3-201ENST00000568585 713 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AC112187.3-201ENST00000607844 408 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AL691403.2-201ENST00000618460 490 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AP000280.1-201ENST00000624800 832 ntBASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFCAB3Q8N7B9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 AC114341.1-201ENST00000618070 349 ntBASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 AL513523.2-202ENST00000427283 2040 ntBASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 AL513477.1-201ENST00000602865 2407 ntBASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFCAB3Q8N7B9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC105917.1-201ENST00000506637 2539 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 RCN1P2-201ENST00000398357 915 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC103564.2-201ENST00000432853 1299 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms