Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 GGT3P-204ENST00000453783 1664 ntBASIC13.15□□□□□ -0.31
TTC9CQ8N5M4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TTC9CQ8N5M4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TTC9CQ8N5M4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TTC9CQ8N5M4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.15□□□□□ -0.31
TTC9CQ8N5M4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 ME2P1-201ENST00000426028 1970 ntBASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 AL031731.1-201ENST00000642131 2094 ntBASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TTC9CQ8N5M4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 HCG4B-203ENST00000450128 991 ntBASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AL031432.2-201ENST00000566714 459 ntBASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AL928711.1-201ENST00000570165 459 ntBASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 Z83851.2-201ENST00000609564 659 ntBASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms