Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18■□□□□ 0.47
VPS52Q8N1B4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18■□□□□ 0.47
VPS52Q8N1B4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18■□□□□ 0.47
VPS52Q8N1B4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18■□□□□ 0.47
VPS52Q8N1B4 AC026150.2-201ENST00000564693 1156 ntBASIC18■□□□□ 0.47
VPS52Q8N1B4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18■□□□□ 0.47
VPS52Q8N1B4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18■□□□□ 0.47
VPS52Q8N1B4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS52Q8N1B4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
VPS52Q8N1B4 AC008677.1-201ENST00000519230 1561 ntBASIC18■□□□□ 0.47
VPS52Q8N1B4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 NKILA-202ENST00000614771 2598 ntBASIC17.99■□□□□ 0.47
VPS52Q8N1B4 WASH6P-202ENST00000359512 1437 ntBASIC17.99■□□□□ 0.47
VPS52Q8N1B4 AC016396.2-201ENST00000562575 1417 ntBASIC17.99■□□□□ 0.47
VPS52Q8N1B4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 HCG4-201ENST00000418983 998 ntBASIC17.99■□□□□ 0.47
VPS52Q8N1B4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.99■□□□□ 0.47
VPS52Q8N1B4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS52Q8N1B4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC011676.5-201ENST00000624864 2660 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms