Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 RBM17P3-201ENST00000417687 1192 ntBASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 LINC02447-202ENST00000501888 2146 ntBASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC170Q8IYT3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 SLC22A20-204ENST00000530038 1673 ntBASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 AL049597.2-201ENST00000565575 961 ntBASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC170Q8IYT3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AL353732.1-201ENST00000569618 1459 ntBASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 PMS2P1-201ENST00000431037 1228 ntBASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AC139887.3-201ENST00000568585 713 ntBASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AC004706.3-202ENST00000621574 984 ntBASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC170Q8IYT3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms