Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 AL354718.3-201ENST00000616414 581 ntBASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 CR382287.1-201ENST00000623954 586 ntBASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 RPL17P11-201ENST00000417593 544 ntBASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD4Q7Z3J3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 AC138951.2-201ENST00000623455 1161 ntBASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 AC092978.1-202ENST00000637590 1327 ntBASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.53■□□□□ 0.88
RGPD4Q7Z3J3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 AC093503.3-201ENST00000624917 2352 ntBASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 HSPB1P2-201ENST00000448722 546 ntBASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 AL096828.3-201ENST00000615354 462 ntBASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RGPD4Q7Z3J3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 RN7SL769P-201ENST00000469386 295 ntBASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 RPSAP36-202ENST00000494591 1261 ntBASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RGPD4Q7Z3J3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms