Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC141Q6ZP82 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.34■■□□□ 1.49
CCDC141Q6ZP82 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 NSL1-201ENST00000366976 722 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 SUOX-214ENST00000551841 906 ntTSL 3 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 LINC01144-201ENST00000626198 1710 ntBASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 CLK3P2-201ENST00000427566 1453 ntBASIC24.33■■□□□ 1.49
CCDC141Q6ZP82 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC141Q6ZP82 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AZGP1P1-201ENST00000411909 902 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC234783.1-201ENST00000441761 496 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 MIR4259-201ENST00000584466 101 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC015936.2-201ENST00000593177 259 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 SPIB-207ENST00000597855 564 ntTSL 4 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 HLA-A-202ENST00000376806 1854 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 AC010319.3-201ENST00000597028 470 ntBASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC141Q6ZP82 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 CDC14C-201ENST00000428251 1719 ntBASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 RPL13P2-201ENST00000440687 659 ntBASIC24.31■■□□□ 1.48
CCDC141Q6ZP82 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms