Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC034105.1-201ENST00000563488 319 ntBASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 HCG4-201ENST00000418983 998 ntBASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 CXCL1P1-201ENST00000502804 216 ntBASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 TSPY26P-202ENST00000565928 3884 ntBASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 AC006449.5-201ENST00000610658 2098 ntBASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NHLRC1Q6VVB1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 MIR4515-201ENST00000584082 81 ntBASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 Z83851.2-201ENST00000609564 659 ntBASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
NHLRC1Q6VVB1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms