Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AC073439.1-201ENST00000624121 1774 ntBASIC19.66■□□□□ 0.74
CTR9Q6PD62 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AL512356.2-201ENST00000546955 174 ntBASIC19.66■□□□□ 0.74
CTR9Q6PD62 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTR9Q6PD62 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTR9Q6PD62 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 GPAA1P2-202ENST00000606848 1787 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 SPDYE14P-201ENST00000442619 822 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 HLA-J-202ENST00000469281 1241 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 CYMP-203ENST00000474680 1263 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC025678.2-201ENST00000562061 970 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC026150.2-201ENST00000564693 1156 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AP001059.3-201ENST00000619053 235 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTR9Q6PD62 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.65■□□□□ 0.74
CTR9Q6PD62 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTR9Q6PD62 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTR9Q6PD62 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTR9Q6PD62 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTR9Q6PD62 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTR9Q6PD62 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTR9Q6PD62 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.64■□□□□ 0.74
CTR9Q6PD62 AC084018.2-201ENST00000613093 2607 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms