Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AC087641.1-201ENST00000557561 1021 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 MPDU1-223ENST00000582151 728 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AL031055.1-201ENST00000606362 631 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AP001059.3-201ENST00000619053 235 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AC084121.4-201ENST00000641598 221 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 AF228730.8-201ENST00000642140 221 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 WASH6P-202ENST00000359512 1437 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 TNRC18P3-201ENST00000441896 2691 ntBASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RTL6Q6ICC9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 RBPMS2P1-201ENST00000437762 623 ntBASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 IGHV3-62-201ENST00000520057 340 ntBASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 KRT8P23-201ENST00000560090 1207 ntBASIC14.96□□□□□ -0.01
RTL6Q6ICC9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 AC131009.4-201ENST00000624048 1740 ntBASIC14.96□□□□□ -0.01
RTL6Q6ICC9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTL6Q6ICC9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms