Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC243960.2-201ENST00000600996 747 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC133552.6-201ENST00000613406 534 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 KLF2P4-201ENST00000451959 1225 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 KRT90P-201ENST00000549264 1064 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC124283.3-201ENST00000570869 594 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 MIR663B-201ENST00000408361 115 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 CYP4F24P-201ENST00000586049 1580 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AZGP1P1-201ENST00000411909 902 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC136604.1-201ENST00000418535 575 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AL359711.2-201ENST00000563105 872 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 AC009053.2-201ENST00000563701 2365 ntBASIC10.93□□□□□ -0.66
VPS13DQ5THJ4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CNN2P8-201ENST00000421872 913 ntBASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC139713.2-201ENST00000641328 2723 ntBASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC020907.1-201ENST00000616460 1350 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms