Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC068587.6-202ENST00000641839 5619 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC073347.1-201ENST00000421633 2643 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 BX276092.5-203ENST00000456199 560 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 LINC01238-205ENST00000567549 1107 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 BNIP3P18-201ENST00000593976 575 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 Z69720.1-201ENST00000601483 472 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AL121672.3-201ENST00000608644 468 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC073592.4-201ENST00000623827 446 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC233702.3-201ENST00000578656 1387 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 LINC02447-202ENST00000501888 2146 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CDC14C-201ENST00000428251 1719 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 LINC01144-201ENST00000626198 1710 ntBASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00242Q5T6M2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PRAL-201ENST00000624952 3286 ntBASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 AC104076.2-201ENST00000448912 469 ntBASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms